HW7CJAFXY_n01_C24SPL14_col_B_l-c.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HW7CJAFXY_n01_C24SPL14_col_B_l-c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	364782
Sequences flagged as poor quality	0
Sequence length	76
%GC	36

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGCCCC	40	4.5894056E-5	43.748714	63
TTCCGCG	35	0.0012548233	39.998825	36
CGCCCCA	35	0.0012548233	39.998825	64
TCCGCGG	50	0.0072050523	27.999178	37
CTCGGCC	50	0.0072050523	27.999178	68
TTCGCTG	65	7.9502293E-4	26.922285	63
GCAGACC	70	0.0012251592	24.999266	36
AGGGTTG	85	0.0037865231	20.58763	50
CTGACCC	85	0.0037865231	20.58763	47
CGATGGT	85	0.0037865231	20.58763	66
CCGAGAC	105	5.457821E-4	19.999413	29
CCAGGGG	90	0.005262642	19.449203	3
GACAAGG	95	0.0072026243	18.420511	16
CAGGGGT	100	0.009664437	17.504284	4
CACTATG	100	0.009679709	17.499487	18
AATAGGA	220	0.0056576827	11.136037	13
TCATGTT	290	3.2341157E-4	10.86175	43