HW5TCBGXF_n02_dpr156.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW5TCBGXF_n02_dpr156.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	591049
Sequences flagged as poor quality	0
Sequence length	76
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCGAGCCCACGAGACACCGCTGTCTCTTATACACATCTGACGCTGCCGAC	2683	0.4539386751352257	No Hit
TGCTTACACCACATGAAACACTGTCTCTTCTATAGGATCATTTATTTCAC	1135	0.19203145593681742	No Hit
CCCCTATACTATATCAATTTACCAGAACTCTACTCAACTAACTTCATAAT	1067	0.18052648765161602	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	710	0.1201254041543087	No Hit
CGTCTAGACTGTGTGCTGTCCTTTCATGCCTTGACGGCTATGTTGATGAA	651	0.11014315225979572	No Hit
CCTTAGACGCTTCATGATCTAACAACTTACTATGGTTGGCATGCATAATA	604	0.10219118888620063	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCACGAG	460	0.0	67.71535	7
CGAGACA	450	0.0	67.66462	10
CGAGCCC	450	0.0	64.597336	2
ACCGCTG	430	0.0	64.300385	16
GCCCACG	485	0.0	63.50324	5
CCGAGCC	460	0.0	63.25732	1
TCGGTGG	480	0.0	61.24815	70
ACGTGTA	440	0.0	61.248146	59
ACGTCCG	40	1.0662916E-8	61.248146	5
ATACCGG	40	1.0662916E-8	61.248146	37
CACCGCT	460	0.0	60.867725	15
TCGGGGA	35	2.9741022E-7	59.998188	8
CTCGGTG	490	0.0	59.998188	69
CGTACGC	35	2.9741022E-7	59.998188	33
CGAGATA	485	0.0	59.8951	50
ATCTCGG	485	0.0	59.17347	67
GGACGCA	30	8.292887E-6	58.430458	1
GATCTCG	500	0.0	58.098244	66
TCTCGGT	510	0.0	57.64532	68
ACGAGAT	490	0.0	57.141132	49