HW5TCBGXF_n01_dpr164.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW5TCBGXF_n01_dpr164.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	64294276
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGATTGACAGGGA	421635	0.6557893271867623	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCCGATTGACAGGGACAGCCG	143535	0.2232469341438731	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	56660	43.462425	64
TCTCGTA	48785	43.11743	63
TCGTATG	62875	42.68993	65
AGGGACA	74590	42.62938	46
GGGACAG	75105	42.24387	47
AGCCGAG	77040	40.86936	52
CAGGGAC	78025	40.80199	45
ATCTCGT	50665	40.60563	62
GACAGGG	79025	40.467262	43
TTGACAG	81130	39.434555	41
ACAGGGA	80940	39.419018	44
ATTGACA	82450	38.956036	40
GGACAGC	83395	38.048748	48
TGACAGG	86040	37.232975	42
CGTATGC	76610	36.598724	66
CCCATCT	58090	36.023994	59
GACAGCC	89320	35.64628	49
GTATGCC	78875	35.50781	67
CATCTCG	58625	35.426594	61
GATTGAC	91445	35.2045	39