HW5T7BGXF_n02_cDNA4_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW5T7BGXF_n02_cDNA4_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	80241573
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	944194	1.176689295460347	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	216941	0.27035985448590344	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	133064	0.16582925162745749	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	120825	0.15057655960956798	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	119359	0.1487495764820064	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	85326	0.1063363999606538	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	257035	46.969234	1
AGCAGTG	284655	42.358063	2
CAGTGGT	354105	34.000587	4
ATCAACG	362570	33.16495	11
TGGTATC	363370	33.047462	7
GTATCAA	365790	32.852535	9
TCAACGC	365965	32.82908	12
AGTGGTA	367145	32.81672	5
CAACGCA	366850	32.78307	13
TATCAAC	367455	32.772823	10
AACGCAG	369425	32.58614	14
GGTATCA	369130	32.540176	8
GCAGTGG	371320	32.534264	3
ACGCAGA	370090	32.51968	15
AGAGTAC	370465	32.38863	19
GTGGTAT	375630	32.019974	6
CAGAGTA	376965	31.941336	18
GCAGAGT	376240	31.932894	17
GAGTACT	374145	31.88837	20
CGCAGAG	378555	31.795904	16