HW5T7BGXF_n02_cDNA3_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW5T7BGXF_n02_cDNA3_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	132286697
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1486375	1.1236012643055107	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	318484	0.2407528551415869	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	211089	0.1595693329617263	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	190662	0.14412787099824556	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	189530	0.1432721538130172	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	136903	0.1034896199728987	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	413630	46.870544	1
AGCAGTG	457975	42.28258	2
CAGTGGT	568150	33.987904	4
ATCAACG	581510	33.212307	11
TGGTATC	582925	33.04749	7
GTATCAA	586935	32.880795	9
TCAACGC	587455	32.864796	12
TATCAAC	589675	32.811104	10
AGTGGTA	589460	32.80489	5
CAACGCA	589615	32.78338	13
AACGCAG	593670	32.596592	14
GGTATCA	591895	32.576523	8
ACGCAGA	594470	32.525833	15
GCAGTGG	597105	32.470356	3
AGAGTAC	594585	32.393463	19
GTGGTAT	603595	31.967617	6
CAGAGTA	605825	31.904345	18
GAGTACT	600375	31.89466	20
GCAGAGT	605040	31.887285	17
GTACTTT	597840	31.84519	22