HW5T7BGXF_n02_cDNA1_0909.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW5T7BGXF_n02_cDNA1_0909.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	73340746
Sequences flagged as poor quality	0
Sequence length	57
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	826945	1.1275382991059295	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	202388	0.2759557422554714	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	117882	0.16073193474197822	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	105458	0.14379182889685904	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	104470	0.14244469234059878	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	77798	0.10607745931572607	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	228845	46.89592	1
AGCAGTG	253785	42.21603	2
CAGTGGT	315875	33.87673	4
ATCAACG	323710	33.046658	11
TGGTATC	324290	32.907238	7
GTATCAA	326645	32.722996	9
TCAACGC	326895	32.72211	12
AGTGGTA	327230	32.71888	5
CAACGCA	327850	32.652443	13
TATCAAC	327865	32.65002	10
AACGCAG	329965	32.47861	14
ACGCAGA	330325	32.4262	15
GGTATCA	329335	32.42334	8
AGAGTAC	330610	32.261326	19
GCAGTGG	333100	32.25041	3
GTGGTAT	334465	31.938868	6
CAGAGTA	336215	31.846674	18
GCAGAGT	336225	31.809412	17
GAGTACT	333975	31.746653	20
GTACTTT	332470	31.72485	22