FastQCFastQC Report
Sat 23 Dec 2017
HW37FAFXX_n02_bc_c06.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHW37FAFXX_n02_bc_c06.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1221
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG272.211302211302211No Hit
GTAACTGTATATTTGATAGAGAATGGACATTGGCGTCCAATAGCGCAAGT20.16380016380016382No Hit
GTTCTTTGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTC20.16380016380016382No Hit
GTATGCTAATAGACCAAGGCTAGTAGGACGCAAACCTGCTGAGCATCCGT20.16380016380016382No Hit
ATGTAGGAAAAAGGTTAAAACAAGAACCACTAACACGCTAGATAGGTAGA20.16380016380016382No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)