HW32WAFXX_n02_zt2ss90.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW32WAFXX_n02_zt2ss90.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1393547
Sequences flagged as poor quality	0
Sequence length	75
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3109	0.2230997591039269	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGAATTAAAAGTGAAACCGCAAAAGGCT	2444	0.1753798041974903	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAACTACGAACGTTTTAACCGCA	2054	0.14739366522980565	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGATCGCTTGGTTTTAGCC	1959	0.14057652881460045	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGATAATG	1828	0.13117605649468586	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCGGTACAAGACCATACGATC	1807	0.12966911055027208	No Hit
CATATAAGAACTCCACCGGTAATACGCTTACATACATAAAGGTATAGTACTAACCACAATTGTAAGTTGTACTAC	1565	0.11230335252417033	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGC	1410	0.10118065626778287	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGTTC	465	38.73526	3
CGGTAAC	160	34.491394	25
GCGAGAC	675	34.363083	6
GTTCCGA	705	32.22554	1
TCCCATC	610	31.657406	22
CCGTTCT	540	31.421944	4
TTCCCAT	605	31.349054	21
CTACTAA	575	30.39332	1
TTCCGTT	595	30.274279	2
CTTCCCA	620	30.033337	20
ACTCGTC	420	29.557678	23
GTCTCGC	355	29.27388	2
AGACCAC	625	28.690653	22
CTTCCGT	515	28.504803	1
GACCACA	595	28.398556	23
CCCATCT	690	27.986982	23
CTCCTAG	215	27.636715	1
GTTCCGT	230	27.353989	1
GGAAGAC	585	26.526123	19
GAAGACC	650	26.52517	20