Basic Statistics
Measure | Value |
---|---|
Filename | HW32WAFXX_n02_zt2ss81.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1595443 |
Sequences flagged as poor quality | 0 |
Sequence length | 75 |
%GC | 67 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 232859 | 14.595256615247301 | No Hit |
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 39848 | 2.497613515493816 | No Hit |
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 31689 | 1.9862195014174748 | No Hit |
GGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 18112 | 1.1352332863035532 | No Hit |
GGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 9471 | 0.5936282273951498 | No Hit |
CGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 5527 | 0.34642415930873116 | No Hit |
GGGCGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 3962 | 0.2483322813789023 | No Hit |
GGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 3208 | 0.20107268012708696 | No Hit |
GGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 2151 | 0.13482148845179676 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCGGGGC | 1135 | 0.0 | 43.329258 | 7 |
CGTCTAC | 310 | 0.0 | 40.566647 | 1 |
GGCCGGG | 3165 | 0.0 | 40.48838 | 5 |
CTAGTCG | 125 | 0.0 | 38.798622 | 3 |
GCCGGGG | 3370 | 0.0 | 38.228577 | 6 |
CGGGGCG | 2575 | 0.0 | 38.03162 | 8 |
CTACACG | 330 | 0.0 | 37.787292 | 4 |
TACACGT | 345 | 0.0 | 37.143692 | 5 |
GGCGGCC | 1855 | 0.0 | 36.79386 | 2 |
CGGCCGG | 1765 | 0.0 | 36.306488 | 4 |
GGGGGCC | 1850 | 0.0 | 36.144203 | 2 |
GTCTACA | 360 | 0.0 | 34.645996 | 2 |
CGGCGGC | 4645 | 0.0 | 34.36836 | 1 |
AGTCGTG | 275 | 0.0 | 34.004276 | 5 |
CCGGGGG | 2495 | 0.0 | 32.48135 | 7 |
GGGGCCG | 2105 | 0.0 | 32.255386 | 3 |
TCGGGCG | 580 | 0.0 | 32.25255 | 3 |
GTCGTGT | 280 | 0.0 | 32.1581 | 6 |
GGCGGCG | 7575 | 0.0 | 31.970364 | 2 |
GCGGCCG | 2215 | 0.0 | 31.74831 | 3 |