HW32WAFXX_n02_zt2ss75.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW32WAFXX_n02_zt2ss75.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	928525
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2983	0.3212622169570017	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGAATTAAAAGTGAAACCGCAAAAGGCT	1241	0.13365283648797824	No Hit
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	1166	0.125575509544708	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAACTACGAACGTTTTAACCGCA	1080	0.11631350798309147	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGATAATG	983	0.10586683180312863	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGATCGCTTGGTTTTAGCC	970	0.10446676179962844	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCGGTACAAGACCATACGATC	954	0.10274359871839744	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTTCCGA	580	41.527164	1
TCCGTTC	275	39.040718	3
AGTAGAG	520	36.62302	5
GCGAGAC	685	36.39064	6
TTCCGTT	310	35.757828	2
TTCCCAT	470	33.753506	21
GTCTCGC	340	33.62156	2
TCCCATC	510	31.782394	22
ACTCGTC	340	31.444283	23
CCGTTCT	360	30.78313	4
TAGAGAA	530	30.698896	7
GTAGAGA	610	30.648674	6
CTTCCGT	355	30.482075	1
CGTTCTG	205	30.40279	5
CTTCCCA	565	29.298927	20
AGAGTAG	475	29.164543	3
CTCCTAG	175	27.925514	1
GAGTAGA	500	27.704817	4
AAGCTTG	225	27.697319	6
TCATCCG	720	27.411774	5