HW32WAFXX_n02_zt2ss70.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW32WAFXX_n02_zt2ss70.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	220815
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	339	0.15352217919978262	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGAATTAAAAGTGAAACCGCAAAAGGCT	292	0.13223739329302808	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGATCGCTTGGTTTTAGCC	270	0.12227430201752598	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCGGTACAAGACCATACGATC	259	0.11729275637977492	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAACTACGAACGTTTTAACCGCA	259	0.11729275637977492	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGC	232	0.10506532617802233	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTAAGA	20	0.0069774175	52.437256	1
TAGCCAT	20	0.007228097	51.971413	4
TAGCACT	20	0.007228097	51.971413	4
TACAGTG	20	0.0072346115	51.959576	5
GTACCCT	20	0.0073658214	51.723988	11
TATTGAG	35	0.0013189722	39.58825	5
CTTCCCA	55	7.38125E-6	37.625973	20
TAGATAG	65	5.4267E-7	37.152016	24
TCCTACA	40	0.0025352451	34.655506	2
TGAACCG	40	0.0025409183	34.639717	5
ACCTGGG	40	0.0026010964	34.474842	33
CGTTCTG	55	3.1724316E-4	31.490652	5
GTTCCGA	100	1.2651071E-8	31.462353	1
GCACCTT	45	0.0046311785	30.644304	55
AATGTTA	60	5.409737E-4	28.748583	25
TTAGAGG	85	4.4319604E-6	28.391047	63
CAGGACC	50	0.007562304	27.718088	4
AAAAGCG	50	0.0075707184	27.711775	5
GGACCTT	50	0.0075707184	27.711775	6
GATCTAG	75	5.9744325E-5	27.711775	6