HW32WAFXX_n02_zt2ss23.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW32WAFXX_n02_zt2ss23.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1627397
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	10952	0.6729765386073588	No Hit
GTTATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACACACGAATTAAAAGTGAAACCGCAAAAGGCT	2338	0.14366500614170974	No Hit
GTATAGTACTAACCACAATTGTAAGTTGTACTACCCGTATGAAGCACAAGTTCAACTACGAACGTTTTAACCGCA	2226	0.13678285015887334	No Hit
GTACAAGACCATACGATCTGCATGTTATCTAGAGTTCAACCAATATAACGATCTTGCGATCGCTTGGTTTTAGCC	2091	0.12848739428670447	No Hit
GTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCGGTACAAGACCATACGATC	1981	0.12172813394641872	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGATAATG	1971	0.12111365573366548	No Hit
ATCTAGGACTACCATGGTTGCAACGGGTAACGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGC	1684	0.1034781310276472	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGTTC	530	41.170036	3
TTCCGTT	610	35.771793	2
GCGAGAC	970	33.89794	6
CTTCCCA	745	33.791576	20
CCGTTCT	680	32.07949	4
GTTCCGA	810	31.47011	1
CTACTAA	490	31.35574	1
CTTCCGT	595	31.104221	1
TTCCCAT	825	30.932829	21
CGTTCTG	460	29.35004	5
TCCCATC	880	28.999527	22
GACGTCT	810	28.525393	20
AGACGTC	825	28.424763	19
CTATTAG	235	28.232296	1
TAGGACG	185	28.068647	5
GTCCTAC	200	27.935112	1
TCTTCCC	885	27.666674	19
CTCCTAG	190	27.567545	1
TCCTACA	460	27.106579	2
GACCACA	675	27.077839	23