HW32WAFXX_n01_zt2ss84.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW32WAFXX_n01_zt2ss84.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1606024
Sequences flagged as poor quality	0
Sequence length	75
%GC	49

Per base quality graph

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4257	0.26506453203688113	No Hit
TCGTAATACTAATGCCCCCAAACTGCTTCTATTAATCATTACCTCTTGATCTGAAAACCAATGAAAGCAGAACAG	2784	0.17334734723765025	No Hit
GTCTTACGACGGTCCAAGAATTTCACCTCTCGCGTCGTAATACTAATGCCCCCAAACTGCTTCTATTAATCATTA	2727	0.16979820974032767	No Hit
GTACTATTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGATAATG	2503	0.1558507220315512	No Hit
TCATTATCCCATGCACAGAATATTCAGGCATTTGAAGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAATAGTA	2192	0.13648612972159818	No Hit
GGATAATGAAATAAGACCTCTGTTCTGCTTTCATTGGTTTTCAGATCAAGAGGTAATGATTAATAGAAGCAGTTT	1811	0.1127629475026525	No Hit
GCTTAAAGCAGGCTTCAAATGCCTGAATATTCTGTGCATGGGATAATGAAATAAGACCTCTGTTCTGCTTTCATT	1637	0.10192873830029937	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	750	31.739801	41
TATGCCG	755	29.243938	43
GTATGCC	820	27.346537	42
CCGTCTT	880	26.266062	47
TGCCGTC	810	25.980509	45
GGTCCAA	1170	25.652885	11
GCCGTCT	840	25.463335	46
TCGTATG	895	24.670237	40
CTCGTAT	865	24.329327	39
CGGTCCA	1255	23.640549	10
TAATCTC	915	23.376902	35
ATGCCGT	920	22.874144	44
TGCTTGA	835	22.7237	55
CTAATCT	970	22.406378	34
GACGGTC	1350	21.976955	8
TCGCGTC	1320	21.69237	30
CTCGCGT	1305	21.67735	29
GTTCGAA	560	21.566393	69
GCTTGAA	960	21.561693	56
GTCCAAG	1395	21.26802	12