HW32WAFXX_n01_zt2ss53.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW32WAFXX_n01_zt2ss53.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	65381
Sequences flagged as poor quality	0
Sequence length	75
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGA	707	1.0813539101573852	No Hit
GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA	565	0.8641654303237943	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	106	0.16212661170676496	No Hit
AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGA	84	0.12847769229592695	No Hit
GAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGAGAGAAGA	74	0.11318272892736421	No Hit

$Adapter graph$

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTAAAC	20	8.4562096E-5	68.99694	63
TATAGAT	15	0.0023460072	68.99693	7
GAGACGC	20	0.0073072948	51.787327	66
ACAAATG	20	0.0073294677	51.747704	65
TGCTGAA	20	0.0073294677	51.747704	48
TCATAAC	20	0.0073294677	51.747704	55
AAGGGAA	55	1.4333273E-7	43.940765	69
GAAAAGG	45	9.870327E-5	38.36098	66
ACAGAGG	40	0.0025694154	34.524887	66
AAAGAGG	50	1.834522E-4	34.524883	66
CTCATAA	40	0.0025790925	34.49847	54
AAGAGGG	85	1.1715747E-7	32.49401	67
AAAAGGG	85	1.1715747E-7	32.49401	67
AGAGGGG	90	1.9345316E-7	30.688786	68
CCGGGAG	45	0.004592185	30.665304	14
AGGAAAA	45	0.004592185	30.665304	63
AAAGGGA	60	5.3445046E-4	28.770737	68
GAAGAGG	100	4.866033E-7	27.619907	66
GAGAGGA	225	0.0	26.085468	69
GAAGGGA	70	0.0013148936	24.660631	68