FastQCFastQC Report
Sun 21 Jan 2018
HW32WAFXX_n01_zt2s69.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHW32WAFXX_n01_zt2s69.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length75
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAACAGGATCTGCCATCGACGCCGCGGTCAAGGGCCAACGACAATGGACGGGTAGCGGCTGGCGGAGCATCGAGT19.090909090909092No Hit
GGGTTGTAAAGCTCTTTTGTCCGGGACGATAATGACGGAACCGGAAGAATAAGCCCCGGCTAACTTCGTGCCAGC19.090909090909092No Hit
GGTCAGGAGTTGATAGCGATGAAAGGACTGACGATCACCCCACTGCTGTGGAAGAAATCGAGCAGGACGCTCCCA19.090909090909092No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
CATCCGAGCTGTACTGGGAGACGTGTGCTCTTCCGAATCTCACTTATACACATCTACTAGCCCAAGAGACCCTAT19.090909090909092No Hit
GTCCTGGGGAGCACCGGCTCCTCCCTTAATAGAAGACCATCGGAAAGGCCGTGGTAGCATCCTTCAAATTTCACT19.090909090909092No Hit
GGTAAGTTCCGACCTGCACGAATGGCGTAACGATGGCCACACTGTCTCCTCCTGAGACTCAGCGAAGTTGAAGTG19.090909090909092No Hit
AGAAAGTTGTTTGACAGCCTCTTTGGATGTGTTTGCACACAATTCCGCCCTTATGTTACACTAAAGCACCTAGAT19.090909090909092No Hit
GCCTAATACATGCAAGTCGAGCGAACAGACGAGGAGCTTGCTCTTTTGACGTTAGCGGCGGACGGGTGAGAAACA19.090909090909092No Hit
CATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGCACCGTAATAGTTACGGCCGCCGTTTA19.090909090909092No Hit
TGTTTAGAGAGCATAAAACTTGAATTACGCACAATCAGAAGTAATTTTGAGAATACATTAAGCAACAGTGTTGTC19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)