HW2TNAFXY_n02_ncm5-3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2TNAFXY_n02_ncm5-3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3691059
Sequences flagged as poor quality	0
Sequence length	76
%GC	35

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	8193	0.22196881707932603	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGAGATC	2645	37.71218	5
AAAGGGG	9305	37.12473	70
CCGTATC	13625	35.06377	55
CGTATCA	14550	33.91709	56
CGCCGTA	14470	33.59667	53
CTAGATC	2600	33.518803	5
TCGCCGT	13850	33.458057	52
GTCGCCG	19030	33.270725	51
CAAGATC	4140	33.13967	5
GGTCGCC	19310	32.969543	50
TGGTCGC	16540	32.7777	49
GCCGTAT	17335	32.607025	54
TCGCGTA	290	32.60346	1
ATCTCGG	18550	32.226006	42
GATCTCG	17790	32.146862	41
AGATCTC	17130	32.098248	40
TCGCCGG	5165	31.713053	52
CTCGGTG	17555	31.560406	44
CCGGATC	4985	31.38375	55
TCTCGGT	16995	31.364708	43