HW2NGBGX5_n01_zmtarget0523-6597u2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0523-6597u2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8228061
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCACTCAATCTCGTATGC	32773	0.3983076936352319	TruSeq Adapter, Index 7 (97% over 35bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	19792	0.2405426989420715	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	16225	0.19719105145185484	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	10728	0.1303830878259167	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	4915	55.75719	44
TCGTATG	5000	54.66866	43
TATGCCG	5065	53.691338	46
CTCGTAT	5005	52.236797	42
GTATGCC	5355	51.241196	45
ACTCAAT	5785	46.76834	35
ACGTCTG	6160	46.195133	15
AGTCACC	6250	44.297333	28
CACGTCT	6425	44.28981	14
CCACTCA	6250	44.072525	33
CGTCTGA	6630	42.865753	16
TCTCGTA	6065	42.818924	41
CAGTCAC	6525	42.645218	27
GTCTGAA	6745	42.498135	17
ACCACTC	6665	41.485107	32
CACTCAA	6675	41.16154	34
CTCAATC	6305	40.967724	36
CACACGT	7065	40.723347	12
AATCTCG	6370	40.549194	39
AAAAGGG	6490	38.666233	70