HW2NGBGX5_n01_zmtarget0523-6597s.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0523-6597s.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10177963
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTGATATATCTCGTAT	151401	1.487537339249514	TruSeq Adapter, Index 25 (97% over 44bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	39657	0.38963592223709204	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	21609	0.21231163838972494	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	20381	0.2002463557786563	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	13401	0.13166681781020426	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	11278	0.11080802710719227	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	11141	0.10946198173445905	No Hit
TTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	10453	0.10270227942467465	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	17435	64.27778	46
CTCGTAT	17455	63.34224	44
TATGCCG	17675	63.28617	48
TCGTATG	17745	63.23376	45
GTATGCC	17980	62.193165	47
TATCTCG	17975	61.587997	41
GTCACAC	18840	60.209045	29
TCTCGTA	18605	59.577465	43
ACTGATA	19060	59.496307	34
AGTCACA	19250	58.981216	28
TATATCT	18900	58.629894	39
TCACACT	19450	58.230774	30
CAGTCAC	19620	57.833256	27
TGATATA	19595	57.782864	36
ATATCTC	19210	57.701702	40
CCGTCTT	19550	57.126457	52
GATATAT	19930	56.86484	37
CTGATAT	19995	56.766953	35
CACACTG	19960	56.690586	31
ACGTCTG	20395	56.495327	15