HW2NGBGX5_n01_zmtarget0523-6435s.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0523-6435s.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8907131
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGTAGCATCTCGTATGC	88962	0.9987727810447606	TruSeq Adapter, Index 22 (97% over 37bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	27071	0.3039250236692376	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	14401	0.16167944537921358	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	14024	0.1574468816053115	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	9401	0.10554464731685209	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	10880	62.375244	44
TCGTATG	11080	61.091396	43
CTCGTAT	10815	61.034935	42
TATGCCG	11095	60.946396	46
GTATGCC	11400	59.346184	45
AGTCACG	11590	58.979248	28
TAGCATC	11890	54.957973	36
GGTAGCA	12385	54.93806	34
CGGTAGC	12430	54.93597	33
GTAGCAT	12230	54.775475	35
ACGGTAG	12495	54.62218	32
TCTCGTA	12045	54.046432	41
CAGTCAC	12650	53.981777	27
CACGGTA	12845	53.135624	31
ACGTCTG	13090	53.04785	15
AAAAGGG	11825	52.68501	70
CACGTCT	13255	52.44031	14
CCGTCTT	13015	51.578384	50
GTCTGAA	13615	51.104267	17
ATGCCGT	13320	50.713238	47