HW2NGBGX5_n01_zmtarget0523-3357s.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0523-3357s.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8922267
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGATCCAATCTCGTAT	111422	1.2488081784595775	TruSeq Adapter, Index 19 (97% over 37bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	22133	0.24806475753303506	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	13421	0.15042141195729739	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	11830	0.13258962100103033	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	11049	0.12383624027391243	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	10956	0.12279390428463977	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	10774	0.120754063961547	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	13910	63.40804	46
TCGTATG	13935	63.244045	45
CTCGTAT	13265	63.21906	44
TATGCCG	13990	62.918594	48
GTATGCC	14285	61.743145	47
AGTCACG	14640	60.509956	28
TCTCGTA	14100	58.929466	43
ACGTGAT	15050	58.907036	32
AATCTCG	14170	58.391678	41
CACGTGA	15165	58.369644	31
TCACGTG	15200	58.188534	30
GTCACGT	15405	57.414196	29
CAGTCAC	15575	56.83279	27
CCAATCT	14720	56.185516	39
CCGTCTT	16045	54.859844	52
GCTTGAA	16130	54.72509	61
ACGTCTG	16430	54.386242	15
ATGCCGT	16300	54.02308	49
GCCGTCT	16395	53.731388	51
CAATCTC	15430	53.7142	40