HW2NGBGX5_n01_zmtarget0523-183u2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0523-183u2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23625654
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAAAAGATCTCGTATGC	1434464	6.071637212667214	TruSeq Adapter, Index 7 (97% over 37bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	197868	0.8375133234406971	No Hit
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	78096	0.3305559287374648	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	48533	0.20542500114494183	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	33485	0.14173152624685012	No Hit
TTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	25210	0.10670604081478548	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	167665	65.81153	43
CTCGTAT	162985	65.79021	42
CGTATGC	167925	65.78828	44
TATGCCG	167660	65.76269	46
GTATGCC	169160	65.23335	45
TCTCGTA	164580	64.56128	41
AAAAGGG	160715	63.893154	70
AGTCACC	173565	63.874203	28
CCGTCTT	172590	63.662216	50
CAGTCAC	174545	63.63977	27
GCCGTCT	173175	63.416843	49
ATGCCGT	174215	63.27224	47
GCTTGAA	174385	63.24843	59
TGAAAAA	176530	63.028984	62
CCAGTCA	177210	62.731953	26
TGCTTGA	175735	62.66695	58
ACGTCTG	179380	62.60838	15
AGATCTC	168860	62.47877	38
GTCTGAA	180005	62.390957	17
TGCCGTC	176580	62.370903	48