HW2NGBGX5_n01_zmtarget0523-183s.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0523-183s.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10625539
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTTTCGGAATCTCGTAT	368761	3.470515707485521	TruSeq Adapter, Index 21 (97% over 40bp)
TTTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGA	70614	0.6645686397650039	No Hit
TTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGT	40792	0.3839052305958314	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	33904	0.3190802838331307	No Hit
TTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTA	19953	0.18778341503428675	No Hit
TTTTCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAG	17493	0.1646316483333222	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	13944	0.1312309897879063	No Hit
TCCACCTTAGAGTACAAACGGAACACGAGAATTTTTACCCTACAGAGTAA	12617	0.11874221157157298	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	41305	66.304794	44
CGTATGC	43345	66.187355	46
TATGCCG	43495	65.91051	48
CGTTTCG	46435	65.908	33
TCGTATG	43040	65.84352	45
TTTCGGA	46625	65.676636	35
ACGTTTC	46805	65.44619	32
CACGTTT	46910	65.339165	31
TTCGGAA	46780	65.25671	36
GTATGCC	44285	65.06697	47
AGTCACG	47100	65.03751	28
TCGGAAT	46615	64.90986	37
GTCACGT	47480	64.4663	29
GTTTCGG	48035	63.785824	34
TCTCGTA	43040	63.640083	43
CAGTCAC	48150	63.561092	27
CCGTCTT	44040	63.116024	52
TCACGTT	48645	62.986855	30
ACGTCTG	49195	62.9639	15
GCTTGAA	44470	62.902496	61