HW2NGBGX5_n01_zmtarget0521-6435s.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0521-6435s.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38245605
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGCTTATCTCGTATGC	122606	0.32057539683317865	TruSeq Adapter, Index 10 (100% over 50bp)
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	74135	0.1938392659757899	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	56415	0.14750714493861453	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	53208	0.13912186772833113	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAG	39089	0.10220520763104676	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	17715	53.245174	44
TATGCCG	18040	52.499626	46
TCGTATG	18245	51.52581	43
CTCGTAT	18560	50.06673	42
GTATGCC	20430	46.443382	45
TATCTCG	20350	45.43912	39
AGTCACT	23500	41.822292	28
GTCACTA	23980	41.087265	29
TCTCGTA	22805	40.76222	41
TTATCTC	22990	40.556736	38
TCACTAG	24175	40.553047	30
GCTTATC	23675	40.25541	36
CTTATCT	23595	39.90255	37
ACGTCTG	25190	39.405273	15
TAGCTTA	25995	37.672752	34
CACGTCT	26515	37.59438	14
CACTAGC	26290	37.34366	31
CAGTCAC	26685	36.98792	27
CCGTCTT	26325	35.73726	50
ATGCCGT	27205	34.91608	47