HW2NGBGX5_n01_zmtarget0521-3357s.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW2NGBGX5_n01_zmtarget0521-3357s.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14591571
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGATCAGATCTCGTATGC	73374	0.5028519547346889	TruSeq Adapter, Index 9 (100% over 50bp)
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	30402	0.20835316498819764	No Hit
GGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGAC	20686	0.14176677754574885	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	20472	0.14030017741064343	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAG	15528	0.10641760232671316	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	9805	57.648724	44
TCGTATG	10165	55.77883	43
CTCGTAT	9925	55.29392	42
TATGCCG	10375	54.380127	46
AGTCACG	10695	53.0823	28
GTATGCC	10800	52.369797	45
GTCACGA	11585	48.913692	29
TCTCGTA	11250	48.345966	41
TCACGAT	12615	45.19725	30
ACGTCTG	13015	44.452984	15
CGTCTGA	13285	43.785442	16
ACGATCA	13185	43.53384	32
CACGTCT	13440	43.125412	14
CACGATC	13235	43.08011	31
CAGTCAC	13225	42.953743	27
AAAAGGG	12170	42.82278	70
ATGCCGT	13450	42.18155	47
GTCTGAA	13835	41.86756	17
CCGTCTT	13555	41.802876	50
ACACGTC	14080	41.190025	13