HW23FBCXY_l01n01_s1_ibh-30656_rr.351000000a9ad6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW23FBCXY_l01n01_s1_ibh-30656_rr.351000000a9ad6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3200544
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTACATGTACTTGGACAGGAGCGATGCTGGTAAGGCCATTTCTTTCGTTA	4655	0.1454440245158323	No Hit
ATTCATTAGAGTGTGACCCAGCCGTCATAGGAACAGCTGTCAAGGGAAAG	4330	0.13528950078486657	No Hit
CTAATGAATAGTCCTCTCTGACCTTCAGCCAAACACTGGTGTGGAAGACC	3717	0.11613650679384503	No Hit
TATTTACACAGTGACAAGAAATGCCGGTCTGGTTAAGAGACGTGGAGGTG	3695	0.11544912364897968	No Hit
TCATAGTACTGGTGTATGGGCACAGCACCTTTATGCAGAAGGCCCCTGGT	3404	0.10635691932371497	No Hit
ATTCCACACCATGAGCATGTCCTCATTAGTCATCCATTCTCCCTTTCCAT	3315	0.1035761420558505	No Hit
GGTAATACAGATCTGAAAAGTCAAGGCCTGTCCTTGGTTCACAATCAAGT	3274	0.10229510983132868	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTATC	10	0.0070901127	145.01007	1
TTCGAGT	450	0.0	101.5023	2
CGAGTTT	460	0.0	100.87027	4
TCGAGTT	465	0.0	99.7872	3
GTTCGAG	465	0.0	98.232635	1
GCGACAG	85	0.0	93.83005	1
CTAAAAT	65	1.6370905E-11	89.23279	3
GCGTCAG	35	3.4372497E-5	82.86291	1
CGAGGGG	55	4.3977707E-8	79.09023	145
AGCAGGG	55	4.3977707E-8	79.09023	145
CGACAGT	100	0.0	72.50165	2
AACTTCG	40	6.665195E-5	72.50051	6
TAAAATT	40	6.665195E-5	72.50051	4
ACAGTTC	105	0.0	69.0481	4
TCTATCC	345	0.0	67.2458	8
CACGCCC	45	1.1943089E-4	64.44389	145
AGTTGCC	45	1.1943089E-4	64.44389	145
ATCTTTT	35	0.0035673422	62.14232	145
GCTTTTT	795	0.0	62.013985	2
GGCTTTT	815	0.0	61.384636	1