HW23FBCXY_l01n01_s1_421_rr.351000000a9944.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW23FBCXY_l01n01_s1_421_rr.351000000a9944.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	940257
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACAACAGCTTGTGCAAAGGCCCTGAGGCATGAATGATTAAAAGATATAAT	2286	0.24312501794722083	No Hit
GTTATAACCTGTGTTTGAGAAAGGCTAGCTCTGTTTCTATTGCCATAATT	1521	0.16176428359480438	No Hit
AGCACGCACTTTCCATTTTTCATCTGCAACACAGAAAGTTGGGGGGAGTT	1426	0.15166066298894876	No Hit
ACAACAGCCAACATAGATACCACAGGGCACAAAAGGCCAGGAATACAAAA	1319	0.1402807955697219	No Hit
GCGGTGCAGACCACAAACAGAATAAACAAAAGGTAAATTGTTGGACTTAA	1178	0.12528489551260985	No Hit
CACGAGCATAGAGGACCATTTCCAATCTCTCATTCCTTATCTTTTCATAG	1106	0.11762741463238244	No Hit
GTCTCGCTCTGTCGTCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCAC	1075	0.11433044369784007	No Hit
GTAGTAACAAGAGCTATGTTTAGGTCTCTCTCTCCTTGACACCTGACACA	1044	0.1110334727632977	No Hit
TCTGTATACCCTCTAATGAAAATTTTTTAAAGTACCAAGAAATTAAAAAG	955	0.10156797556412768	No Hit
GTGCAGAAGCTTTGAGCTTAGTGGATGCAGAGGGCGTTGTGAATCAGAGC	943	0.10029172875075645	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCACTT	555	121.48555	5
TAGTAAC	1520	110.65704	2
GTAGTAA	1605	105.259605	1
GTAACAA	1680	99.68674	4
TAACAAG	1895	88.75922	5
GCACGCA	865	78.78552	2
AGCACGC	935	72.8949	1
AAGAGCG	445	68.426445	9
AGTAACA	2550	65.96027	3
CGGTGCA	570	59.780243	2
ACGCACT	1160	59.374542	4
TCTCGCT	490	59.183212	2
AACACGA	1010	56.71352	1
ACGAGCA	620	56.1286	2
CTCGCTC	495	55.656136	3
TCGCTCT	525	53.856728	4
ACAAGAG	3150	53.166256	7
CGCTCTG	535	51.49493	5
CGAGCAT	395	51.392006	3
AACAAGA	3290	50.903866	6