HW23FBCXY_l01n01_s1_338_rr.351000000a977c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HW23FBCXY_l01n01_s1_338_rr.351000000a977c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1931819
Sequences flagged as poor quality	0
Sequence length	151
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAAGGGACATGAACAACAAAGATGCAAGGCAAAAGATAAAGGAGGA	2346	0.12143994856661001	No Hit
GTATAGTATGGTTATCCAATCCATCATCATTTAAAGATGCAGCAGTAATG	2332	0.1207152429911912	No Hit
TGATACAACCATGTCAGCTATTATGGAGCTGTTAGCTATTATCGTTTTGT	2140	0.11077642367116174	No Hit
GTAGTAACAAGAGGATTTTTATTTTAAATTCACAAGCACTGCCTGCTGTA	2112	0.10932701252032412	No Hit
GTATGTAGAAACCAGCCTGCTGCAACAGCACTAAACACAACAATAACCTC	2064	0.10684230769031675	No Hit
GTCTAATTGTCTCCCTCTTCTGGTGATAATCGGTGCTCTTGACCAAATTG	1978	0.10239054486988687	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACACGA	595	0.0	75.54949	6
AAACACG	635	0.0	74.21582	5
CACAGCG	30	0.0019356834	72.50314	3
GAGCAGA	700	0.0	69.39946	1
ACACGAG	660	0.0	67.00702	7
CACGAGC	675	0.0	65.517975	8
ACGAGCC	255	0.0	65.39161	9
GAAACAC	745	0.0	63.25778	4
CGGTGAG	40	0.0060519367	54.374546	145
AGAAGCG	520	0.0	50.194485	5
ACGCACT	65	7.3367206E-4	44.617317	4
GAAGCGG	575	0.0	44.13235	6
GTGTAGG	100	2.7336828E-6	43.50414	1
AGCACGC	85	5.3403513E-5	42.651115	1
CGGAGCC	85	5.341983E-5	42.64891	3
GTAACAA	2295	0.0	42.01707	4
GCACGCA	70	0.0010563909	41.432514	2
CGGTGCA	175	5.2750693E-11	41.432514	2
ACACGTG	70	0.0010569292	41.428226	7
CAGAAGC	1140	0.0	40.703518	4