Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage basic_statistics per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content avg_sequence_length per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores HW22CDRX2_l02_n01_scN2updated HW22CDRX2_l02_n01_scN2updated.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HW22CDRX2_l02_n01_scN3updated HW22CDRX2_l02_n01_scN3updated.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HW22CDRX2_l02_n01_undetermined HW22CDRX2_l02_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 201702015.0 0.0 28.0 48.0 94.37297884557448 pass pass pass pass pass pass pass pass 28.0 pass pass pass HW22CDRX2_l02_n02_scN2updated HW22CDRX2_l02_n02_scN2updated.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HW22CDRX2_l02_n02_scN3updated HW22CDRX2_l02_n02_scN3updated.fastq.gz null Illumina 1.5 0.0 0.0 0.0 0.0 100.0 pass pass pass pass pass pass pass warn HW22CDRX2_l02_n02_undetermined HW22CDRX2_l02_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 201702015.0 0.0 90.0 42.0 53.54477788223536 pass warn pass pass pass warn warn pass 90.0 pass pass pass