Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content HW22CDRX2_l01_n01_ScWTupdated HW22CDRX2_l01_n01_ScWTupdated.fastq.gz Conventional base calls Sanger / Illumina 1.9 61938742.0 0.0 28.0 48.0 97.4419671783863 28.0 pass pass pass pass pass pass pass pass pass pass pass HW22CDRX2_l01_n01_scN1update HW22CDRX2_l01_n01_scN1update.fastq.gz Conventional base calls Sanger / Illumina 1.9 17.0 0.0 28.0 52.0 100.0 28.0 pass pass pass pass fail fail pass pass pass fail pass HW22CDRX2_l01_n01_undetermined HW22CDRX2_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 171014808.0 0.0 28.0 48.0 88.1762640578556 28.0 pass pass pass pass pass pass pass pass pass pass pass HW22CDRX2_l01_n02_ScWTupdated HW22CDRX2_l01_n02_ScWTupdated.fastq.gz Conventional base calls Sanger / Illumina 1.9 61938742.0 0.0 90.0 43.0 60.9174415977152 90.0 pass pass warn pass warn pass pass pass warn fail pass HW22CDRX2_l01_n02_scN1update HW22CDRX2_l01_n02_scN1update.fastq.gz Conventional base calls Sanger / Illumina 1.9 17.0 0.0 90.0 62.0 100.0 90.0 pass pass pass warn fail fail pass pass pass fail pass HW22CDRX2_l01_n02_undetermined HW22CDRX2_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 171014808.0 0.0 90.0 44.0 47.60432680739454 90.0 pass pass pass pass warn pass pass pass fail warn pass