FastQCFastQC Report
Fri 3 Mar 2023
HW22CDRX2_l01_n01_scN1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHW22CDRX2_l01_n01_scN1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences255
Sequences flagged as poor quality0
Sequence length28
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCTTCTCACCTAACCTTGGTATAGCA10.39215686274509803No Hit
TGTGCGGGTCGCTTAAACTCGATGGTAA10.39215686274509803No Hit
CCGTCCCCGCCCCTTGCCTCTCGGCGCC10.39215686274509803No Hit
GATGGAGGTACAGGTGCCCGGAAATTGG10.39215686274509803No Hit
CGTGTCATGAACGGGTGTGTGCTCAGCT10.39215686274509803No Hit
AGTCATGTCTACCACCGGTCTTCTTTCG10.39215686274509803No Hit
TCTCAGACACCAAACAACACTGTCACCT10.39215686274509803No Hit
CTCAGGTTCCCCCAGGTTTTGTGCATGT10.39215686274509803No Hit
CCTTCAGTCACCGGGTGGTACCCTAACA10.39215686274509803No Hit
CTCATTACACATAGCTTGCAAAAATAAA10.39215686274509803No Hit
AGACCCGAGAGCCGATGTGCTCCCACGC10.39215686274509803No Hit
GTGCTGGGTTACCGTAATTTCCCGCCCG10.39215686274509803No Hit
CGCCATTCTCCAGTCTATGAACAGTCTC10.39215686274509803No Hit
GATCAATACACAGCATCAATCTTAGGCC10.39215686274509803No Hit
GGGCTACTCCTTGAAGCGGGATTCAAAT10.39215686274509803No Hit
CCTAACCCATTGTGCACGGGCCGTACCC10.39215686274509803No Hit
TACCCACGTTGAAGTAACGAAAAACTGC10.39215686274509803No Hit
TCTTAGTTCAGACATCCCTAGCAGTCTA10.39215686274509803No Hit
GTAGGACTCCACAAGTGCCCGCGCCGCA10.39215686274509803No Hit
GTTGTGGTCCTGGCGGCTGGTTCTTTTG10.39215686274509803No Hit
CACTGAAGTTATCCAGCAGCCGCGGTAA10.39215686274509803No Hit
GCTGGGTTCGTCGACGGACCGTCAAGGC10.39215686274509803No Hit
GGTAATCTCAGCTCTCCGCCGTTAGCAT10.39215686274509803No Hit
GGCAGTCCAGGTGGTACCTGGGCAGTGT10.39215686274509803No Hit
ATCTTCAAGGGCAAGGGCAGTCCTATGG10.39215686274509803No Hit
CGTGAATCACCCTGAGGCGTGTAACCTC10.39215686274509803No Hit
GGCTGTGCAGTTGAAAGTAGTGTTCGTC10.39215686274509803No Hit
TCTCTGGAGAGCAGCTAAGTCCGGGCCA10.39215686274509803No Hit
TTCGATTGTGACGTCCTCTAAGGGGTCC10.39215686274509803No Hit
CCACCTCTCTATACTAATCTCCCTACAA10.39215686274509803No Hit
ATGGGTTCAATCGTGGCTAACCGGATGG10.39215686274509803No Hit
CACTGAAGTCGCGGTTGGACGTACTCTG10.39215686274509803No Hit
GTTTACTGTCCTGTTCTACCCCTATTAA10.39215686274509803No Hit
CATTCCGTCAGCTTCCAGCTCCAAAATA10.39215686274509803No Hit
GGAGAACTCCACTAGATCCTACAATGAG10.39215686274509803No Hit
ACTACGAAGGTCCGAAGCCCCGCGGTCG10.39215686274509803No Hit
TGTGAGTTCGTGCGACAGTTCCACCAGG10.39215686274509803No Hit
TCAATCTTCCGCACGACGGCCCTCGAAC10.39215686274509803No Hit
CTCCTGTGTTAGCGGACAAGGGGTTGCA10.39215686274509803No Hit
GTGTTCCGACTGGGACAGCTGTGGGAGT10.39215686274509803No Hit
CAACAACCTATTTAGCTGTTCCCCAACC10.39215686274509803No Hit
CCTGTGACACCGCAACTAACTTCTCTGC10.39215686274509803No Hit
TGGATGTGTTGTTTGGCCCTCTCTTTTT10.39215686274509803No Hit
CTCAACCCAGCCGGTTCCGTAGCTCTCG10.39215686274509803No Hit
GTTATGGCATGGTGGATAGCTCACTGGC10.39215686274509803No Hit
GGTTGGAAGCCAAGTGTGGTTCTAGGTT10.39215686274509803No Hit
GTTTACTTCGTTCCGGTCGGGAACTCAG10.39215686274509803No Hit
GGCACGGCGACTCCCATCGAAAGTTGAT10.39215686274509803No Hit
ACTCGACTCACTGTTTTCTTGACTTGAT10.39215686274509803No Hit
AGCGCCATCTGGGCGTACCGGCTATGGA10.39215686274509803No Hit
CTCCCTCTCCGGTAGCACCCGCCCTCGG10.39215686274509803No Hit
GACCTTTAGTGTCAACTATGCCATAATA10.39215686274509803No Hit
CATGCTCCAATGTCTGGCCGTGACGGGA10.39215686274509803No Hit
ATCGTCCGTGTGGAAACTCACTGACTGG10.39215686274509803No Hit
CGTGCTTTCATAGGCTGCCACCGGGCCT10.39215686274509803No Hit
CTTGAGAAGGTATCTCCATTCCCATGGT10.39215686274509803No Hit
CACGATCTCTCACGTTCCCCGGCCCCGC10.39215686274509803No Hit
GTTGCCTATAGGTCGAGTAAGCCGGTCT10.39215686274509803No Hit
ATTCCCGCACGACGCTCCTCTGGTCCCC10.39215686274509803No Hit
GTCAAGTCACCTTGCACGCCGCTTCGCA10.39215686274509803No Hit
CTCACCCGTCTTCGAACACCGTAAAACC10.39215686274509803No Hit
ACTATCTTCAGGTAAACTTCGTCCTATA10.39215686274509803No Hit
ATACTTCCCTCCCCCGCCCCACCCCGCG10.39215686274509803No Hit
GTAGATCATACCTCCGGCCACCAGAAAA10.39215686274509803No Hit
TAAGTCGCATCGAAGGTCAGGCCGTGTC10.39215686274509803No Hit
ATTCCCGTCCTCGCCCTCCCCCACCACG10.39215686274509803No Hit
CCTCATGCAATTCTCTACTGACATGAGC10.39215686274509803No Hit
GTGACAACACGTTACGGCTATGCTAATA10.39215686274509803No Hit
CACAGATGTCGAATTCTGCTACCCAACC10.39215686274509803No Hit
AGTGCCGCACAGTACTACGCCGATTCCT10.39215686274509803No Hit
TCATTGTTCCTACAAGTGGGGCTCCTAA10.39215686274509803No Hit
GATGATCCAGCAGCCGCGGTAATTCCAG10.39215686274509803No Hit
GAGTGAGGTGAATTAGCGTGGAGGGACT10.39215686274509803No Hit
CGCAGTTGTCAACTAAGCATAGGTTCCG10.39215686274509803No Hit
TTCTCCGCATGAGTAATAAACAACTTTA10.39215686274509803No Hit
CGTGAATGTACAACGGAAGCGCACTGGG10.39215686274509803No Hit
GGGCTACTCCTTGAAGACTCTGTGCGAT10.39215686274509803No Hit
CGTGCGAGTCCGGACTTATTGTCCAAAA10.39215686274509803No Hit
ACTGGCTTCTAGACCACGCGCTGCCGAG10.39215686274509803No Hit
TGATTCTCACGGTAGACGGTTTAAACGA10.39215686274509803No Hit
CCTCTCCGTACAATGGCGGTTCAACGTT10.39215686274509803No Hit
GCACGGTTCTACTTACCGAATTATCTGC10.39215686274509803No Hit
GCTGCAGAAAGGTTGGGTCTGATGAAAC10.39215686274509803No Hit
GTCAAACGTCCGAAGATAGTCCCGAACA10.39215686274509803No Hit
GACTCAACATGGGTCCAGCAGAGTCAGG10.39215686274509803No Hit
GCATTAGTCGATCCAACAGCATTGCGTA10.39215686274509803No Hit
CGTATCGTCAGGGATGTGGGGGGTTCGA10.39215686274509803No Hit
AGGCTGCCATAAGCAATTCAGTAGTGTG10.39215686274509803No Hit
TCTCTGGCAGCACAGAAGGCCGCACCAC10.39215686274509803No Hit
TGAGACTTCCCGAATAGTCCCTACCCTG10.39215686274509803No Hit
GTATTTCCAATACGAATAGCCCTACATT10.39215686274509803No Hit
TCAGGTAGTTCTCCACGGTTCCCGTGCC10.39215686274509803No Hit
GGCGGGTGGTGAGGGTAGTATTGGCTAG10.39215686274509803No Hit
CTTCCTTGTTGTTTGGGATTTTAACGGT10.39215686274509803No Hit
GGACGTCTCTGCACCTATTTATCAAGGG10.39215686274509803No Hit
CCCAACTTCGGCCTTCAAAGTTCTCGTT10.39215686274509803No Hit
ACAGCCGCAATTGCACCTCGCAGAACCT10.39215686274509803No Hit
CTGTATTAGTGGGTGAACAATCCAACGC10.39215686274509803No Hit
CGAGGCTGTGCGGCTTGCGGGCGCTTCC10.39215686274509803No Hit
GTCATTTCATGGACAGAATATCTTGCTG10.39215686274509803No Hit
TTCTTCCCAAAGACGCTGGGAGCAAGAT10.39215686274509803No Hit
TCAAGTGGTGGCAGATCATAAGGTATTC10.39215686274509803No Hit
TTCCTTCTCGGAGATGACGACCTATGTA10.39215686274509803No Hit
AGCATCAGTACGATGGCTCGCAGCACAG10.39215686274509803No Hit
GTCATTTCAGCAGACAGTCTGGGACATC10.39215686274509803No Hit
AGAAGCGCAATACAGACCCCAACTCGCA10.39215686274509803No Hit
GGTGGTGGGGGGGGGGGGGGGGGGCGCC10.39215686274509803No Hit
CTCAGTCGTGGTAATAGAAAGGCGAACT10.39215686274509803No Hit
CTCAGGGCACCTGAATTCGAGGGAATGT10.39215686274509803No Hit
CTAACCCAGCCATTCATCGCGCCGAACT10.39215686274509803No Hit
TGATGGTCAGAACCGACACTGAGACCCA10.39215686274509803No Hit
TCGAACATCGGCTGGTTCTTCCCGGAAC10.39215686274509803No Hit
CTGGTTGTCGGCCTTTCTCAACCCCCCG10.39215686274509803No Hit
GATCCCTTCCACTGAACAACACATAAAG10.39215686274509803No Hit
CGCATAAGTTCTTGCCCCCTCTTTGAAA10.39215686274509803No Hit
TCCTCCCGTTAGCTACCTCGGCAACCCC10.39215686274509803No Hit
AGATGCTTCACTGCTCTGATGTTACATA10.39215686274509803No Hit
CGCAGGTCAATAGGATGATCGTCTATAC10.39215686274509803No Hit
TTTGACCAGATACCAGATAATCACAAAT10.39215686274509803No Hit
TAGCACAGTACCGTGCATCCAGCAGGCT10.39215686274509803No Hit
TACTTCAAGGAACTCGCGATTATGAATC10.39215686274509803No Hit
ACAATCTTCACCCATCCCGCCGGAGACT10.39215686274509803No Hit
AGGTTACCACACTGCCTCTTCCCTAGGT10.39215686274509803No Hit
CTTACCGTCCCGAATACGGGGCGGTGGC10.39215686274509803No Hit
CCCTCCCCACCCCGCGCCCTCTCTCTCT10.39215686274509803No Hit
GAACGACGTCGAGCAACCGTTGGTCAGT10.39215686274509803No Hit
ACCGTCAGTATCTCGAGGAGGACACTTG10.39215686274509803No Hit
GTCAGAATCGAACGTACAACCCTGGCCA10.39215686274509803No Hit
CAGTTAGAGAGTCTGGGTAGATAGTAAG10.39215686274509803No Hit
ACGTCCTAGCATATGATTACACTCTGTC10.39215686274509803No Hit
GCCATGGCAAGTTCGTAATGGTGGTCCA10.39215686274509803No Hit
TGTGCGGCATCGCCTTTGCTGGTTGCAC10.39215686274509803No Hit
GTCTACCTCCCGGTAGGCTTCGAGCCTG10.39215686274509803No Hit
CGATGGCTCAGCAGAGACGGTTCCGCCG10.39215686274509803No Hit
ATGTCCCTCCAACACCACCGCTCTGCCA10.39215686274509803No Hit
GTTCTATTCATAGAGACCAACAGACGCA10.39215686274509803No Hit
TGAAGACAGGAAAGACACCCCGTTTGAC10.39215686274509803No Hit
CGACAGCACCCAGTGTGGTCCGGTGGGC10.39215686274509803No Hit
TTCCGGTTCGAGATAAAGACGTATGACC10.39215686274509803No Hit
TAACCTTGATAAAGTCCTCTGATTGTAT10.39215686274509803No Hit
ACTTTCATCTTCTAACCAGCCTCAGTAT10.39215686274509803No Hit
GGTTCTCTTCCATTTCACGCATCGGGCG10.39215686274509803No Hit
TGTCCTGTCCTAAACGGATAGGATCAAT10.39215686274509803No Hit
TAAGTCGGTGCCCACACTCCGAGACGCT10.39215686274509803No Hit
AGCATCACACCCTTACCCCCATAATGTT10.39215686274509803No Hit
CTCGAGGTCGGCTGACTCCAGTATGCTC10.39215686274509803No Hit
TCATCCGCAAGTGGACCTTCCCCCGCAT10.39215686274509803No Hit
CGGATCTATCGTGCCTCCGACTTACCTA10.39215686274509803No Hit
AGAACCTCCGTCCCCTCCTTCCAGCGGC10.39215686274509803No Hit
GGCTGTGAGGCAGTCAAGCTCTACGCCA10.39215686274509803No Hit
CTTGTGTCTCCAATTTGAGCATGCTAGT10.39215686274509803No Hit
AGACAGGAGGTCACCGGATCCGCGCATA10.39215686274509803No Hit
CTGTCGTAGGTAGGCTATGCGATTTAAA10.39215686274509803No Hit
TGATTTCCTCCGTAAAACAATGTGAATA10.39215686274509803No Hit
ACGGGTCGTCACTTAGGCTTGGGTGCGG10.39215686274509803No Hit
CTGATCCGTTAACCTGTAGCTAGCCAGC10.39215686274509803No Hit
GTCGGGCGAGGCGCTTGCAAGGGAGGAC10.39215686274509803No Hit
GCAACATGTCTCAGATTCCCGGTCACGG10.39215686274509803No Hit
CAACAACAGCATCTTGACCAGTGGGGCA10.39215686274509803No Hit
CGATGGCAGCGGGTATAGGGTCACAAAG10.39215686274509803No Hit
ATACCTTCAACCTAACTGGCCGCACCAA10.39215686274509803No Hit
CTCTCGACAGCTGAAGCAGGAGCGCATG10.39215686274509803No Hit
GGGTGGCGGGGGGGGGGGGGGGGGGGGG10.39215686274509803No Hit
GGGACTCCACCACATAAGCCGTATAAAC10.39215686274509803No Hit
TGTTACTTCAATAATGCCGCTCGCCGGA10.39215686274509803No Hit
TGTGATCAGATGGCGTCCTCATACATGC10.39215686274509803No Hit
ACAGCCGTCCGTAGGCTACTAGGGCACC10.39215686274509803No Hit
GGGACTCCACCACATAGTCCGAAGTCGA10.39215686274509803No Hit
AGCCAGCCATCGAAGGAACAAGCACACG10.39215686274509803No Hit
GGTCTCCACAGCCTGCGGAGCTCGGGGT10.39215686274509803No Hit
GCACATAGTTAAACAGTTGTCGCATACA10.39215686274509803No Hit
GGGATGTAGTTCTACGCCTCCGATTATA10.39215686274509803No Hit
CATACAGTCTGAGTCAGTTCCACTATCG10.39215686274509803No Hit
AGATAGACAAGCTCTAACTGGTCAGCGA10.39215686274509803No Hit
GGCATAACAACCCTCTGTCAATTGTTGG10.39215686274509803No Hit
CGATGCGCATGGAGACGAGGGACCAGGC10.39215686274509803No Hit
TCAATCTGTGTCTTGAGGAGGGAAACGG10.39215686274509803No Hit
CTATCTATCAGAGTTCTTCTCCAAGGGT10.39215686274509803No Hit
ACAGGGATCTGTTCATTGTAGTTTCCTC10.39215686274509803No Hit
TTCTTCCAGCTTCCGGATATGGCGCAGG10.39215686274509803No Hit
CCTCATTTCGGACCACTCCATCCAAAGC10.39215686274509803No Hit
CCTGTTGCACCAGTATATTCCGTATTTG10.39215686274509803No Hit
AACTTCTCAACGCCCAGGGCACGAGGGA10.39215686274509803No Hit
GCATCGGAGATGGTCGGCGGTTGGACTC10.39215686274509803No Hit
GGCTTGGTCAAGTAAGCAGCGCAATTCT10.39215686274509803No Hit
ATATCCTCAAATCAGAATCCACCGACGG10.39215686274509803No Hit
GGGCCATTCGACATACCCGCGGTTGGTT10.39215686274509803No Hit
GCAGCCACAGCCTATATTCCGCATACGG10.39215686274509803No Hit
AGGGCTCAGCTAGAATACAGACACCGAC10.39215686274509803No Hit
AGCTACTCAAGTGCAGCGTGTATCGAAG10.39215686274509803No Hit
CATCCTCTCTCGAACAACACAGTCAATT10.39215686274509803No Hit
AGACAAAGGGTCACTCGGGCTGCTGCCT10.39215686274509803No Hit
ACTGTCCCAAAGGATTAAAACGTGCCAC10.39215686274509803No Hit
TGATTCTCAACACGGGAAACCTCACCCG10.39215686274509803No Hit
TGATGCACAAGTATAGGCTCGAACCACG10.39215686274509803No Hit
CACACAATCACTTCTAAGACCCCATACT10.39215686274509803No Hit
AGGGCTCCAGCACCCACACCGGGATGGT10.39215686274509803No Hit
ACCGTTCGACAGGTGTCCCGCCCCAGTC10.39215686274509803No Hit
GGTTGGAAGTGACCTTGCCCCGCTTGGG10.39215686274509803No Hit
ATTCACTAGGTGCAGTATACCGTAGCTT10.39215686274509803No Hit
CAGCAGATCTGCGAGCGCTCGCTTAGCG10.39215686274509803No Hit
CTGTGGGAGAAGCGCTGCTAGAACGGTA10.39215686274509803No Hit
GCCCAGACAGGCTACCGACCGTTTTAGC10.39215686274509803No Hit
TCAAGTGAGCAGAATGAGAGGAACAACC10.39215686274509803No Hit
CCAATGATCGAGAACGTAGCCAAGCCCA10.39215686274509803No Hit
CTCTAGACACTGGTAAAAGCACATACAT10.39215686274509803No Hit
AGCCAGCCAAGGACACGTTCCTACATAG10.39215686274509803No Hit
CTCCCAAAGACATCAAGTGATACTCCGA10.39215686274509803No Hit
TGCTGCCAGATTTCCGACCGGGAAGGCC10.39215686274509803No Hit
TCATTTGGTCTCAGATACGTTAGCGTTC10.39215686274509803No Hit
ACTGCAATCCACTGGGGCCGGCACCGTA10.39215686274509803No Hit
CCTCTAGCACAAAGTCTGCTGACTTGAC10.39215686274509803No Hit
CTCACTGCACAAGCTTACCGTCCTACTT10.39215686274509803No Hit
ACCAGGGAGTCCATACCTCTCCCGCAGA10.39215686274509803No Hit
ACTTCCGGTGCTGCACCTTCATTATGAC10.39215686274509803No Hit
GGTTCTCAGAGGTACTCCCCCGTAGGAT10.39215686274509803No Hit
TCAGTGAAGCACCTGCCAGCGCAGGATT10.39215686274509803No Hit
TCACAACTCGTCGGGGCGCCCATACGTA10.39215686274509803No Hit
TATTCCTAGATCACTCTCCGCTCACGAC10.39215686274509803No Hit
AGTACTGCAGCGATGTGGGCGTGCTCAG10.39215686274509803No Hit
GGGCTCAGAGCCTTCTTCAACGAGTGAG10.39215686274509803No Hit
CTTCATCTCGTGGCGTTGGCCGGATAGC10.39215686274509803No Hit
CGGGCATCATTGAAAGCTAAAGCTCGGT10.39215686274509803No Hit
ATGTCCCCAATGAACATACGATACATGC10.39215686274509803No Hit
CACTTCGGTTAGGCCCTAGAAACACGTA10.39215686274509803No Hit
GCTACCTTCGCCCAGATTCTCTTTAAAC10.39215686274509803No Hit
AGGATCTAGCGTGCCTATTGGTCAAAAC10.39215686274509803No Hit
GCAGGCTCAAGCCAGTAAGTCGGCCCTT10.39215686274509803No Hit
TTTACTGCACGTATACTCCAAGGTCGCA10.39215686274509803No Hit
ACACTGATCCAAAGGAGAACCACCTCGT10.39215686274509803No Hit
GAAATGAGTAACAGGAGGCTATAATGTG10.39215686274509803No Hit
GTCGTAAAGATACCAACAATTCGAGAGC10.39215686274509803No Hit
GGGTTGTGTAACCGGTTTTTGTTGTGAT10.39215686274509803No Hit
CGGAGAAGTGACATCTCTCCTACGTTAG10.39215686274509803No Hit
GGGCTGTTTTGCCGTCCCCTCCCGCCTG10.39215686274509803No Hit
ATCTTCATTCGCTAGCTTTAGTCCTTCA10.39215686274509803No Hit
GTTCCGTAGGCAGGTTAAGCCCCAACGT10.39215686274509803No Hit
GTACCGCAGTTCACGACCGTTTTCTAAT10.39215686274509803No Hit
GTCTCGATCGGAGTGACACGCTCACCTC10.39215686274509803No Hit
GTCACGGCATGACCCGGCGGCGGCGGGG10.39215686274509803No Hit
AGGACGATCTTAGGACCCATCGAGCCCG10.39215686274509803No Hit
CTGCCTCTCATGAAAGCGCGGCGCGGCA10.39215686274509803No Hit
CCGGGCTTCACTGATGCTTCCTGTCACC10.39215686274509803No Hit
GAGGGTAGTCGTTATGGCGGCTAACCGA10.39215686274509803No Hit
CATTCATATAATTAAAAATAAACAACAA10.39215686274509803No Hit
TCATGGAGTAGCACCGGTCCGGGCAGTA10.39215686274509803No Hit
ATTCACTAGGTGCAGTGGGGGAACCCTA10.39215686274509803No Hit
GGACAACTCGACACTATGGCCAACACTT10.39215686274509803No Hit
GCGGCAAAGTGATGGCCTGCGCAATTTG10.39215686274509803No Hit
GGAGGATGTGCGGTTGGGGGTGATGGGG10.39215686274509803No Hit
CTAACACAGCCATTCAGGCTATGCCTTA10.39215686274509803No Hit
AGAGAGCAGGCATTTCCCGGATGGCGGT10.39215686274509803No Hit
TTCCACGAGGATACCGTGTCTGTGTTAC10.39215686274509803No Hit
CTCCTCCGTAGCTCGCATCCAGACAGCC10.39215686274509803No Hit
TACTTAACAGGCAATGCTCTACTGTGGT10.39215686274509803No Hit

[OK]Adapter Content

Adapter graph