HVYH3BGXB_n01_7G-ABF1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVYH3BGXB_n01_7G-ABF1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1682630
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	4128	0.24533022708498006	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTACAGCATCTCGTATGC	3550	0.21097924083131764	TruSeq Adapter, Index 7 (97% over 35bp)
CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATA	2211	0.13140143703606855	No Hit
GCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAA	1912	0.11363163618858572	No Hit
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA	1881	0.11178928225456577	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	1877	0.11155155916630513	No Hit
CGGCAATCGGGCGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACT	1775	0.10548962041565882	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	1764	0.10483588192294205	No Hit
CACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTT	1755	0.10430100497435563	No Hit
GCGGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTT	1752	0.10412271265816013	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	495	61.504658	46
CGTATGC	515	59.79562	44
GTATGCC	520	58.5477	45
GCACACG	530	58.10847	11
CACGTCT	565	55.129887	14
CACACGT	570	54.03068	12
ACGTCTG	585	53.243523	15
TCGTATG	580	53.094387	43
ACTACAG	575	52.955353	32
CTACAGC	580	52.498844	33
CTCGTAT	580	52.49572	42
AGCACAC	595	52.348675	10
CATCTCG	595	51.771255	39
GCCGTCT	605	50.900402	49
CCAGTCA	615	50.653805	26
CACTACA	610	49.91248	31
TCCAGTC	615	48.946373	25
CAGTCAC	645	47.75798	27
TACAGCA	640	47.57566	34
CTCCAGT	650	46.849297	24