HVYH3BGXB_n01_5G-ABF3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVYH3BGXB_n01_5G-ABF3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1736254
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGACGACATCTCGTATGC	9445	0.5439872276752135	TruSeq Adapter, Index 6 (97% over 36bp)
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	5222	0.30076244604764046	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	2404	0.13845900427011257	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	2286	0.13166276362790238	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	2211	0.1273431191519213	No Hit
CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATA	1904	0.1096613744302389	No Hit
GCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAA	1828	0.1052841346945781	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	1824	0.1050537536558591	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	1120	63.429436	46
CGTATGC	1145	62.04451	44
GTATGCC	1150	61.774757	45
AGTCACG	1170	60.724022	28
CTCGTAT	1175	60.470848	42
GCACACG	1180	60.211147	11
TCGTATG	1190	59.698296	43
ACGTCTG	1200	59.20592	15
GCCGTCT	1205	58.955162	49
CCAGTCA	1225	58.281662	26
CAGTCAC	1240	57.57664	27
CACGTCT	1240	57.297703	14
TCCAGTC	1250	57.116028	25
CATCTCG	1255	56.61776	39
ACGACAT	1260	56.39309	35
AGCACAC	1260	56.38659	10
CACACGT	1280	55.50715	12
GACGACA	1305	54.4485	34
GACATCT	1320	54.094936	37
GAGCACA	1345	53.087925	9