HVYH3BGXB_n01_12G-ZAT6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVYH3BGXB_n01_12G-ZAT6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1577675
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	6289	0.3986245582898886	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCGGCAATCTCGTATGC	4965	0.31470359864991204	TruSeq Adapter, Index 10 (97% over 36bp)
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	3031	0.19211814854136625	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	2796	0.17722281204937645	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	2341	0.14838290522446004	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	2082	0.13196634287796916	No Hit
CAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGCT	1806	0.11447224555120668	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	1784	0.11307778851791402	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATCACTGGTGGACAGCAAAT	1770	0.11219040676945505	No Hit
TCCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATG	1674	0.10610550335145072	No Hit
CCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGC	1586	0.10052767521828007	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	655	54.497967	45
CGTATGC	655	53.963673	44
GCACACG	710	50.770805	11
ACTCGGC	710	49.788124	32
TATGCCG	710	49.78339	46
TCGTATG	745	47.444572	43
ACGTCTG	760	47.432125	15
ACACGTC	755	47.282692	13
CACACGT	760	46.970135	12
TCACTCG	765	46.66758	30
GTCACTC	775	46.51556	29
CTCGTAT	775	45.162167	42
AGCACAC	820	43.96009	10
AGTCACT	815	43.803146	28
CACGTCT	830	43.431828	14
TACTCTA	1730	42.482334	4
GCCGTCT	845	42.243988	49
CAGTCAC	860	41.91809	27
CGGCAAT	865	41.275097	35
ACTCTAG	2190	41.22976	5