HVYH3BGXB_n01_10R-MYB44.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVYH3BGXB_n01_10R-MYB44.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1448553
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	7724	0.5332217737286796	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	3787	0.26143330620281063	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	3638	0.2511471792885728	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	3464	0.23913519215382523	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	3001	0.20717226086998541	No Hit
CAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGCT	2884	0.199095235038	No Hit
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGG	2672	0.18445994036807767	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	2602	0.17962753175065047	No Hit
TATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTAGATA	2591	0.1788681532536262	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCATTTTATCTCGTATGC	2429	0.16768457902472328	TruSeq Adapter, Index 9 (97% over 36bp)
CTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGA	2370	0.16361154890432036	No Hit
CCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGC	2092	0.14441998325225242	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAAT	2084	0.1438677079816893	No Hit
TCCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATG	2007	0.13855205850251942	No Hit
CGGGGATGTCGGCGGGGTGCTTCACGTAGGCCTTGGAGCCGTACTGGAAC	1738	0.11998180252983494	No Hit
CGGGAATTGGATCCGGTACCGAGCTCGAATTCTTAGGCGCCGGTGGAGTG	1557	0.10748657453334466	No Hit
CTTGGATCACAGCCACTAGTAGCCTATGCTCCTAGTACATAGACACCCTA	1511	0.1043109917276068	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	460	50.97344	44
GTATGCC	470	50.633503	45
TATGCCG	490	48.566826	46
TCGTATG	500	46.89556	43
TTGTACT	1910	46.1848	1
CTCGTAT	515	45.532814	42
TACTCTA	1965	45.23901	4
GCACACG	530	44.902958	11
TGTACTC	1985	44.429043	2
ACTCTAG	2340	44.420406	5
ACGTCTG	535	43.83065	15
GTACTCT	2025	43.552937	3
CTCTAGT	2045	43.469265	6
TGCCGTC	560	43.120914	48
ATGCCGT	555	42.878822	47
CACACGT	560	42.497444	12
TCTAGTT	2120	41.269676	7
CACGTCT	575	40.784378	14
GCCGTCT	585	40.081676	49
TATCTCG	585	39.487534	39