HVY3KBCXY_l02n02_chip_ctrl_replicate_3_root_h3k27ac.352000000a590a.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	HVY3KBCXY_l02n02_chip_ctrl_replicate_3_root_h3k27ac.352000000a590a.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9458960
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTGTA	4835	0.0	8.097208	45
GTCGTGT	6200	0.0	7.83871	45
CGTGTAG	4265	0.0	7.069168	45
GAGCGTC	11645	0.0	6.89781	45
GCGTCGT	9840	0.0	6.265244	45
AGAGCGT	12765	0.0	6.204466	44
AAGAGCG	15140	0.0	6.152576	45
AGCGTCG	10335	0.0	6.1393323	45
GTGTAGG	3435	0.0	6.091703	45
CGTCGTG	8485	0.0	5.966411	44
GTAGGGA	2455	0.0	5.8655806	45
TAGGGAA	2540	0.0	5.492126	45
GATCGGA	32330	0.0	5.3866377	45
ATCGGAA	28020	0.0	5.3559957	45
TGTAGGG	2955	0.0	5.3299494	44
GAAGAGC	18570	0.0	5.161551	44