FastQCFastQC Report
Wed 1 Nov 2017
HVY3KBCXY_l02n02_chip_ctrl_replicate_2_root_h3k9ac_09_13_17.352000000a5974.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVY3KBCXY_l02n02_chip_ctrl_replicate_2_root_h3k9ac_09_13_17.352000000a5974.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8823931
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA74800.06.10628345
AAGAGCG39000.05.769231345
AGATCGG106200.05.529660745
AGAGCGT30550.05.523731745
GATCGGA88600.05.409142545
AGCGTCG31300.05.391373645
CGGAAGA68350.05.36576445
TCGGAAG67750.05.31365344
GAGCGTC31350.05.167464345
Produced by FastQC (version 0.11.2)