FastQCFastQC Report
Wed 1 Nov 2017
HVY3KBCXY_l02n01_chip_ctrl_replicate_2_root_h3k9ac_09_13_17.351000000a5977.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVY3KBCXY_l02n01_chip_ctrl_replicate_2_root_h3k9ac_09_13_17.351000000a5977.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8823931
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA76050.06.064994345
CACACGT24550.05.957137645
AGATCGG104400.05.66801545
GATCGGA89500.05.480361545
CGGAAGA67100.05.398574445
TCGGAAG66150.05.37406644
Produced by FastQC (version 0.11.2)