FastQCFastQC Report
Wed 1 Nov 2017
HVY3KBCXY_l02n01_chip_ctrl_replicate_2_root_h3k27ac.351000000a58e2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVY3KBCXY_l02n01_chip_ctrl_replicate_2_root_h3k27ac.351000000a58e2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11870565
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTCTG18750.05.63991345
ATCGGAA90650.05.26191645
GATCGGA109450.05.05702645
Produced by FastQC (version 0.11.2)