FastQCFastQC Report
Wed 1 Nov 2017
HVY3KBCXY_l02n01_chip_ctrl_replicate_1_root_h3k27ac.351000000a58c8.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVY3KBCXY_l02n01_chip_ctrl_replicate_1_root_h3k27ac.351000000a58c8.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16524009
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTCTG28700.05.801310545
ACACGTC46950.05.415258445
CACGTCT42800.05.309503645
GATCGGA190550.05.089142345
Produced by FastQC (version 0.11.2)