FastQCFastQC Report
Wed 1 Nov 2017
HVY3KBCXY_l01n02_chip_ctrl_replicate_3_shoot_h3k27ac_09_13_17.352000000a59ab.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVY3KBCXY_l01n02_chip_ctrl_replicate_3_shoot_h3k27ac_09_13_17.352000000a59ab.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7367641
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCCGAT13001.8189894E-125.88430710
CTTCCGA13204.5529305E-95.11357749
CGTGTGC17453.6379788E-125.02832171
Produced by FastQC (version 0.11.2)