Basic Statistics
Measure | Value |
---|---|
Filename | HVY3KBCXY_l01n02_chip_ctrl_replicate_2_shoot_h3k9ac.352000000a58d2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 16978724 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 57 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAGGGAA | 11425 | 0.0 | 8.54697 | 45 |
AAAGAGT | 4255 | 0.0 | 8.407681 | 45 |
GTAGGGA | 13815 | 0.0 | 7.605796 | 45 |
TGTAGGG | 16265 | 0.0 | 7.331629 | 45 |
GGAAAGA | 10700 | 0.0 | 6.8340516 | 45 |
AGGGAAA | 12905 | 0.0 | 6.4509306 | 45 |
AAGAGTG | 3585 | 0.0 | 6.1505733 | 45 |
CGTGTAG | 22690 | 0.0 | 6.098448 | 45 |
GTGTAGG | 19690 | 0.0 | 5.9877586 | 45 |
GGGAAAG | 11775 | 0.0 | 5.9808393 | 44 |
TCGTGTA | 24970 | 0.0 | 5.7308264 | 45 |
AGAGTGT | 2590 | 0.0 | 5.386053 | 45 |
GAAAGAG | 9480 | 0.0 | 5.268941 | 45 |