FastQCFastQC Report
Wed 1 Nov 2017
HVY3KBCXY_l01n02_chip_ctrl_replicate_1_shoot_h3k27ac_09_13_17.352000000a5967.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVY3KBCXY_l01n02_chip_ctrl_replicate_1_shoot_h3k27ac_09_13_17.352000000a5967.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5789766
Sequences flagged as poor quality0
Sequence length51
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCCGAT11950.09.22544410
CTTCCGA11750.08.6173759
TGTGCTC17050.07.78610943
CGTGTGC15050.07.62404161
GTGCTCT16400.06.9971784
CCGATCT16500.06.954110612
GTGTGCT18300.06.7618142
TCCGATC16200.06.666249311
TCTTCCG17000.06.4855618
GCTCTTC20750.05.42190936
TGCTCTT26100.05.0864165
Produced by FastQC (version 0.11.2)