HVWNMBGXB_n01_9G-ABF3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVWNMBGXB_n01_9G-ABF3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2077618
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	7429	0.3575729513317655	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCATTCATCTCGTATGC	5244	0.25240443623418746	TruSeq Adapter, Index 3 (97% over 36bp)
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	3677	0.1769815240337733	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	3150	0.15161593709719495	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	3094	0.1489205426599115	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	2643	0.127212991031075	No Hit
CAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGCT	2582	0.12427693637617696	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	2324	0.11185886914726385	No Hit
TCCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATG	2139	0.10295444109552382	No Hit
CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATA	2111	0.10160674387688208	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGA	2088	0.10049970687585495	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	595	56.470158	46
CGTATGC	610	55.081554	44
GTATGCC	610	55.081554	45
GCACACG	655	52.364758	11
CTCGTAT	645	51.55	42
TCGTATG	660	50.37841	43
ACGTCTG	675	50.293495	15
CACGTCT	690	49.200157	14
AGCACAC	705	49.14738	10
CACACGT	705	48.154503	12
GCCGTCT	730	46.505383	49
GTCACTC	720	46.182426	29
GTACTCT	1840	45.652927	3
TACTCTA	1885	45.305786	4
CAGTCAC	735	45.23993	27
CATCTCG	745	45.10033	39
GAGCACA	785	44.14192	9
TCTAGTT	1995	42.282417	7
AGTCACT	795	41.825592	28
TCCAGTC	840	41.251675	25