HVWNMBGXB_n01_7G-ABF1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVWNMBGXB_n01_7G-ABF1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2227908
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	5250	0.23564707339800384	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTACAGCATCTCGTATGC	3711	0.16656881702476045	TruSeq Adapter, Index 7 (97% over 35bp)
CCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATA	2956	0.1326805236122856	No Hit
GCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAA	2521	0.11315548038787956	No Hit
CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA	2503	0.1123475475648007	No Hit
CGGCAATCGGGCGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACT	2467	0.11073168191864295	No Hit
GCGGTTATGAGTACGACCGGGCGTGAGCGGCACTCGGTCCTCCGGATTTT	2460	0.11041748582077897	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	2373	0.10651247717589775	No Hit
CACGCTTTCACGGTTCGTATTCGTACTGAAAATCAGAATCAAACGAGCTT	2313	0.10381936776563486	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	490	55.714752	44
TATGCCG	485	55.56997	46
GTATGCC	500	53.901657	45
AGCACAC	555	49.18739	10
CACTACA	555	49.186287	31
TCGTATG	555	48.560055	43
GTACTCT	1310	48.357014	3
GCACACG	560	48.123238	11
CACACGT	570	47.278973	12
CTCGTAT	575	46.261253	42
CTACAGC	590	45.674248	33
ACGTCTG	595	45.29246	15
TACTCTA	1395	45.15964	4
CACGTCT	600	44.915024	14
CATCTCG	610	44.75447	39
TCTAGTT	1425	44.206924	7
ACTACAG	630	42.775253	32
TACAGCA	645	41.780483	34
GAGCACA	680	40.659363	9
CAGTCAC	680	40.146492	27