HVWNMBGXB_n01_1G-ABF3.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVWNMBGXB_n01_1G-ABF3.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1731928
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	6668	0.38500445746012535	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	3499	0.20202918366121456	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	3227	0.1863241428050127	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	3076	0.17760553556498884	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	2546	0.14700380154371312	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGAATATCTCGTATGC	2323	0.1341279776064594	TruSeq Adapter, Index 7 (97% over 37bp)
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	2240	0.12933563058048603	No Hit
TATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTAGATA	2210	0.12760345695664024	No Hit
CAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGCT	2146	0.1239081532257692	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGA	1870	0.10797215588638788	No Hit
GCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAA	1789	0.10329528710200425	No Hit
CCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGC	1738	0.10035059194146638	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	320	52.503246	45
CGTATGC	360	46.66955	44
TATGCCG	385	43.637806	46
GTACTCT	1945	43.547737	3
TACTCTA	1955	43.324986	4
GCACACG	385	42.729916	11
TCTAGTT	2140	40.39853	7
ACGTCTG	435	37.817337	15
CACGTCT	445	36.96751	14
CACACGT	450	36.556763	12
GCCGTCT	465	36.12918	49
CTCGTAT	475	36.106457	42
CGGAATA	470	35.744827	34
TCGTATG	480	35.731377	43
AGCACAC	490	33.571568	10
ACTCTAG	2835	32.96405	5
ACCTACT	900	32.276047	33
CTCTAGT	2715	31.84267	6
CAGTCAC	520	31.635658	27
TATCTCG	535	31.40381	39