HVWNMBGXB_n01_12G-ZAT6.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVWNMBGXB_n01_12G-ZAT6.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2071255
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	7697	0.37161044873760113	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCGGCAATCTCGTATGC	5299	0.2558352303313691	TruSeq Adapter, Index 10 (97% over 36bp)
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	3797	0.18331880912779933	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	3647	0.1760768229889608	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	3000	0.1448397227767706	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	2710	0.13083854957501612	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATCACTGGTGGACAGCAAAT	2391	0.11543725905308617	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	2388	0.11529241933030941	No Hit
CAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGCT	2299	0.11099550755459854	No Hit
TCCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATG	2129	0.10278792326391488	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTATGC	730	52.26231	44
GTATGCC	740	51.556065	45
TATGCCG	770	50.00195	46
GCACACG	810	48.392273	11
TCGTATG	835	46.527637	43
CTCGTAT	830	45.542843	42
AGCACAC	870	44.6526	10
ACTCGGC	855	44.61947	32
TCACTCG	865	44.105762	30
ACACGTC	890	43.649174	13
ACGTCTG	890	43.649174	15
CACACGT	910	42.689846	12
TACTCTA	1870	41.175095	4
GTCACTC	920	41.08856	29
CACGTCT	955	40.678284	14
GAGCACA	960	40.4674	9
CGGCAAT	965	40.259663	35
GCCGTCT	955	39.948235	49
GTACTCT	1950	38.767933	3
TCCAGTC	1025	38.58594	25