HVWNMBGXB_n01_11G-ABF1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVWNMBGXB_n01_11G-ABF1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1983281
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGA	7900	0.3983298382831278	No Hit
CAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTA	4047	0.20405580449769853	No Hit
TTGTACTCTAGTTGTTACCTCTAATGCTGGACACCTACTATCTAACCTCT	3831	0.19316476081805856	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCGAAGATCTCGTATGC	3677	0.18539985004646342	TruSeq Adapter, Index 10 (97% over 36bp)
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATG	3495	0.1762231373163964	No Hit
CCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTT	3295	0.1661388376130261	No Hit
TGATCCAAGTATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGA	2693	0.13578509550588141	No Hit
CAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATGCT	2650	0.13361697106965678	No Hit
TATGAGTGTAGGGTAGTAACAGCACCTGATAGTCCTACAGAGGTTAGATA	2589	0.13054125966012886	No Hit
CTAGTTGTTACCTCTAATGCTGGACACCTGATAGTCCTACAGAGGTTAGA	2387	0.12035611695972483	No Hit
TCCAGCATTAGAGGTAACAACTAGAGTACAACAGCCACTAGTAGCCTATG	2030	0.1023556419892088	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TATGCCG	500	53.905045	46
CGTATGC	500	53.20498	44
GTATGCC	535	51.032814	45
CTCGTAT	540	49.907043	42
TCGTATG	555	48.563107	43
GCACACG	580	45.85596	11
ACGTCTG	580	45.85596	15
AGCACAC	590	45.07874	10
CACGTCT	610	43.60075	14
CACACGT	620	42.89751	12
GCCGTCT	660	40.8351	49
GTACTCT	2265	40.793377	3
TACTCTA	2295	40.717636	4
TCACTCG	665	39.99971	30
TCCAGTC	670	39.182774	25
GAGCACA	700	38.497784	9
CAGTCAC	695	38.276	27
AGTCACT	695	38.275036	28
TCTAGTT	2475	37.896805	7
CCAGTCA	705	37.73308	26