FastQCFastQC Report
Sun 4 Aug 2019
HVWLKBGXB_n02_MG_30830.TR2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHVWLKBGXB_n02_MG_30830.TR2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24512663
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGTGGG126150.017.018282145
TACACCG54750.016.1530935
TCTCGGG78950.015.984841145
TACACTG176500.015.6891215
CTACACT139300.015.2474864
TATACTG243250.014.2149565
CGGAGAT66900.013.2196749
GTATAGG103850.013.2097231
GTGTAGG118350.013.1245351
GTATTAG181850.012.9720451
GTATAGA182600.012.9187661
TAGACTG145250.012.7762615
TATACAG224700.012.6785465
CTATACT171700.012.6235834
TCTATAC174700.012.5737083
CCTACAC107650.012.4586593
GTATAAG178950.012.4521711
CTAACAC164800.012.4052513
CCTATAC101400.012.3686353
TAGACAG255150.012.3587255
Produced by FastQC (version 0.11.5)