HVV32AFXY_n02_TRE_S4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVV32AFXY_n02_TRE_S4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10064908
Sequences flagged as poor quality	0
Sequence length	80
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCGACTCGGTGCCACTTTTTCAACTAGTTCCGCTTACACAGCTTGTCTC	147084	1.461354639307185	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	68238	0.677979371495497	No Hit
TCCGACTCGGTGCCACTTTTTCAACTAGTTCCGCTTACACAGCCTGTCTC	35813	0.35582044068361085	No Hit
TCCGACTCGGTGCCACTTTTTCAACTAGTTCCGCTTACACAGCTCTGTCT	24671	0.24511898171349403	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGACT	937235	73.76651	1
GACTCGG	941990	73.34907	4
CGACTCG	942585	73.335915	3
ACTCGGT	944695	73.133896	5
CTCGGTG	945330	72.94774	6
CCGACTC	948790	72.89952	2
TCGGTGC	941770	72.85034	7
CGGTGCC	940085	72.73604	8
GGTGCCA	944665	72.55353	9
GTGCCAC	949420	72.297	10
GCCACTT	948565	72.24287	12
CCACTTT	949330	72.18082	13
TGCCACT	951320	72.069374	11
ACTTTTT	948600	71.97821	15
CACTTTT	954860	71.951096	14
CTTTTTC	947850	71.79317	16
TTTTTCA	947795	71.73529	17
CAACTAG	957025	71.37984	22
TCAACTA	956995	71.34847	21
AACTAGT	958000	71.32734	23