HVV2GBGX5_n01_las76.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HVV2GBGX5_n01_las76.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8628759
Sequences flagged as poor quality	0
Sequence length	75
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAG	181210	2.100070241850537	TruSeq Adapter, Index 19 (97% over 40bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTGAAACGATCTCGTATGCCGTCTTCTGCGTGAAAAAAAAAG	19508	0.2260811780697549	TruSeq Adapter, Index 19 (97% over 40bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	26185	63.768417	44
TCGTATG	26280	63.524048	45
CGTATGC	26350	63.393803	46
GTATGCC	26920	62.051506	47
CACGTGA	27225	62.018192	31
TCACGTG	27255	61.979164	30
TCTCGTA	26880	61.850395	43
AGTCACG	27495	61.774475	28
GTCACGT	27430	61.706898	29
CCGTCTT	26340	61.38007	52
GCCGTCT	26390	61.325775	51
GATCTCG	27080	61.075783	41
ATCTCGT	27350	60.863476	42
TATGCCG	27565	60.46202	48
ACGATCT	27010	60.344387	39
ATGCCGT	27765	59.952023	49
CAGTCAC	28345	59.776093	27
CGATCTC	27350	59.628563	40
CTGCTTG	23835	59.411472	59
AACGATC	27480	59.386513	38